CDS

Accession Number TCMCG057C13752
gbkey CDS
Protein Id XP_018472670.1
Location join(24865578..24865795,24865985..24866081,24866179..24866315,24866612..24866686,24866945..24867102,24867195..24867295,24867401..24867466)
Gene LOC108843989
GeneID 108843989
Organism Raphanus sativus

Protein

Length 283aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018617168.1
Definition PREDICTED: syntaxin-21-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the syntaxin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K08488        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005484        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006892        [VIEW IN EMBL-EBI]
GO:0006896        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0030133        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030136        [VIEW IN EMBL-EBI]
GO:0030140        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTCCAAGACCTCGAAGCTGGCTCTCGATTTCAGCAGCAGGAGCAGCAGAATCGTGGGAGGAGGCAGCAGCAGAGACCTCTCTCTCGTGGTGGTGATCCGTCTCAGGAGGTAGCCGCAGGGATATTCAGGATCAGCACGGCTCTCAATTCCTTCTTCCGCCTCGTTAATTCCATTGGAACTCCTAAGGACACTCTCGACTTGCGTGAGAATCTGAAAAAGACAAGGTTACAGATATCAGAATTGGTTAAAAACACTTCAGCTAAGCTTAAAGAAGCTAGCGAAGCCGATCTCCATGGAGGAGCAGCTACTCCAATTAAGAAGATTGCTGATGCTAAACTGGCGAAAGATTTCCAATCAGTTCTCAAAGAGTTTCAGAAAGCTCAGAGACTTGCTGCTGAAAGAGAAACTACATATACTCCTGTCGTCACTATAGATATCCCTACCAGTTATAATGCACAGGAACTGGATAGTGAATCTTTAAGGACCTCCCAGCAGCAAACTCTTCTTCTACAATCAAGGAGGCAAGAAGTAGTGTTTCTAGATAACGAGATAACATTCAACGAGGCAATCATCGAGGAAAGAGAGCAAGGAATTAGAGAGATTCAAGAACAGATTGGTGAAGTGAATGAAATCTTCAAAGATCTAGCTGTTTTAGTGAACGATCAAGGAGTTATGATCGATGACATCAGCTCTAACATTGATAACTCACAAGCTGCTACTGCACAAGCCACTGCTCAACTCAGACAAGCATCTAAAACTCAGAGAGCAAACTCATCTTTGACATGTCATCTTATTCTCATTTTTGGGATTGTTCTGCTCATTGTCATCATCGTTATCTTGGTCTGA
Protein:  
MSFQDLEAGSRFQQQEQQNRGRRQQQRPLSRGGDPSQEVAAGIFRISTALNSFFRLVNSIGTPKDTLDLRENLKKTRLQISELVKNTSAKLKEASEADLHGGAATPIKKIADAKLAKDFQSVLKEFQKAQRLAAERETTYTPVVTIDIPTSYNAQELDSESLRTSQQQTLLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIQEQIGEVNEIFKDLAVLVNDQGVMIDDISSNIDNSQAATAQATAQLRQASKTQRANSSLTCHLILIFGIVLLIVIIVILV